I was careless and messed up the installation order of the clasps for https://www.printables.com/model/567590-optimized-bambu-lab-accessory-storage-case
(I placed the insert in the container first before installing the clasps)
l was able to boolean subtract from the clips to give some space and screw them in.
Note: I used M3x6mm instead of the original M3x5mm screws as I needed to find a balance between the strength v.s. making the clasps secure enough.